Find and access public scientific datasets.

Explore neuroscience data from the world's leading institutions and researchers with Blackfynn Discover.

Nueron Mural Image

Public Datasets

  • 1
  • 2
  • 3
Dataset Banner Image

Data portal testing

This dataset is used as part of a testing plan to ensure datasets flow from Blackfynn -> SciCrunch -> data.sparc.science and render successfully on the portal
45 Files
1.29 GB
11 Records
CC-BY-4.0
Jesse Khorasanee updated on April 3, 2020
testing, test
Dataset Banner Image

Quantified Morphology of the Pig Vagus Nerve

This dataset provides binary traces of cross sections of pig vagus nerves from which we quantified the effective nerve diameters, the effective fascicle diameters, and the number of fascicles.
167 Files
1.06 GB
65 Records
CC-BY-4.0
Nikki Pelot updated on April 2, 2020
14 cm from bottom of jaw to top of sternum, 215, 6.25 cm from middle of sample to carotid bifurcation + More
Dataset Banner Image

Quantified Morphology of the Human Vagus Nerve with Anti-Claudin-1

This dataset provides histological cross sections of human vagus nerves that underwent immunohistochemistry (IHC) to label claudin-1 proteins.
227 Files
2.76 GB
65 Records
CC-BY-4.0
Nikki Pelot updated on April 2, 2020
left, medial cervical vagus nerve, 215, microscopy + More
Dataset Banner Image

Hetionet

An integrative disease network
44 Files
3.51 GB
47,031 Records
CC-0-1.0
Joost Wagenaar updated on March 12, 2020
hetionet, hetnet, drug-interaction + More
Dataset Banner Image

Molecular Phenotype Distribution of Single Rat Intracardiac Neurons

Images collected from serial cryostat sectioning of a cryopreserved heart was used to reconstruct the 3D context. Transcriptional profiles taken from isolated single neurons and mapped back into the previously generated 3D context.
2,114 Files
41.65 GB
196 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Alison Moss updated on March 5, 2020
post-juvenile adult stage, laser capture microdissection, rat intracardiac neurons + More
Dataset Banner Image

Prototype Simulation of Undiseased Human Cardiac Ventricular Cells

A prototype use-case package consisting of a single-cell, 1D and 2D tissue model for simulation of autonomic effects on the cardiovascular system derived from the human ventricular model developed by O'Hara and Rudy group.
72 Files
13.46 MB
6 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Colleen Clancy updated on March 3, 2020
beta-adrenergic stimulation, computational models, heart + More
Dataset Banner Image

Feline brainstem neuron extracellular potential recordings

Simultaneously recorded cat brain stem neuron extracellular potential with nerve and sorted spike trains.
180 Files
2.21 TB
34 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Kendall Morris updated on March 2, 2020
swallow, phrenic, trachea + More
Dataset Banner Image

Spatial distribution and morphometric characterization of vagal efferents associated with the myenteric plexus of the rat stomach

Spatial distribution and morphometric characterization of vagal efferents associated with the myenteric plexus of the rat stomach.
360 Files
643.82 MB
18 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Terry Powley updated on March 2, 2020
efferent, stomach, tissue + More
Dataset Banner Image

Rat Vagus Nerve Massons Trichrome

Micrographs of cross sections of cervical and abdominal rat vagus nerve stained with Masson's trichrome.
168 Files
2.76 GB
54 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Nikki Pelot updated on March 2, 2020
vagus nerve morphology, rattus norvegicus, neural anatomy + More
Dataset Banner Image

Spatial distribution and morphometric characterization of vagal afferents (intramuscular arrays (IMAs)) within the longitudinal and circular muscle layers of the rat stomach

Spatial distribution and morphometric characterization of vagal afferents (specifically: intramuscular arrays (IMAs)) within the longitudinal and circular muscle layers of the rat stomach.
422 Files
573.12 MB
22 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Terry Powley updated on March 1, 2020
afferent, stomach, tissue + More
Dataset Banner Image

Spatial distribution and morphometric characterization of vagal afferents associated with the myenteric plexus of the rat stomach

Spatial distribution and morphometric characterization of vagal afferents (specifically: intraganglionic laminar endings (IGLEs)) associated with the myenteric plexus of the rat stomach.
260 Files
302.01 MB
54 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Terry Powley updated on March 1, 2020
immunolabeling, holtzman sprague-dawley rat, staining + More
Dataset Banner Image

Imaging fast neural traffic at fascicular level with electrical impedance tomography - proof of principle in rat sciatic nerve

Proof of concept Electrical Impedance Tomography (EIT) in rat sciatic nerve validated with histology data
170 Files
123.61 GB
17 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Kirill Aristovich updated on February 29, 2020
electrical impedance tomography, uberon:0001374, common fibular nerve + More
Dataset Banner Image

Human Vagus Nerve Stained with Masson's Trichrome

This dataset provides histological images of cross sections of human vagus nerves.
168 Files
8.95 GB
84 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Nikki Pelot updated on February 28, 2020
vagus nerve morphology, vagus nerve, neural anatomy + More
Dataset Banner Image

Quantified Morphology of the Rat Vagus Nerve

This dataset provides binary traces of cross sections of rat vagus nerves from which we quantified the effective nerve diameters, the effective fascicle diameters, the number of fascicles, and the perineurium thickness.
143 Files
205.9 MB
38 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Nikki Pelot updated on February 28, 2020
autonomic nervous system, vagus nerve, vagus nerve morphology + More
Dataset Banner Image

Quantification of rat gastric enteroendocrine cells

This data describes EECs within the rat stomach, including their hormone content, shapes, positions within the mucosa, relationship to other cells and regional distribution.
350 Files
27.88 GB
55 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Martin Stebbing updated on February 28, 2020
corpus, pyy, antrum + More
Dataset Banner Image

Quantification of the relationship between rat gastric nerve fibers and enteroendocrine cells (EEC)

This dataset examines the structural relationship between nerve endings and EECs in the rat gastric mucosa.
258 Files
282.19 GB
26 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Martin Stebbing updated on February 28, 2020
corpus, enteric nervous system, rattus norvegicus + More
Dataset Banner Image

Mapping of human gastric enteroendocrine cells

Characterises EECs in the human gastric fundus and corpus using immunohistochemistry and high resolution 3-D microscopy.
280 Files
120.67 GB
29 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Martin Stebbing updated on February 28, 2020
tissue, 5-ht, gastric corpus + More
Dataset Banner Image

Functional neuronal nodose recording from pig- Modulation by myocardial ischemia and variably coupled PVC's

Linear micro electrode recordings of in vivo pig nodose ganglia cardiac neurons identified with cardiovascular interventions including ischemia and PVC's to determine effects on vagal afferent neurotransmission.
68 Files
47.44 GB
19 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

scott john updated on February 28, 2020
16 channel microarray, pig, pvc + More
Dataset Banner Image

CTb Intrapancreatic 1 week

Quantification of CTB in coeliac, nodose and dorsal root ganglia 1 week after intrapancreatic injection
104 Files
1.71 GB
61 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Maria Jimenez-Gonzalez updated on February 28, 2020
pancreas, tissue, abdominal cavity + More
Dataset Banner Image

Cholera toxin B retrograde tracing from brown adipose tissue and forelimb to the stellate ganglion

Cholera toxin B retrograde tracing from brown adipose tissue and forelimb to the stellate ganglion.
71 Files
17.86 GB
58 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Lori Zeltser updated on February 28, 2020
suprageniculate nucleus of the thalamus, fat pad, brown adipose tissue + More
Dataset Banner Image

Visualizing sympathetic projections in the intact brown adipose tissue depot in the mouse

Visualizing sympathetic projections in the intact brown adipose tissue depot in the mouse
56 Files
13.72 GB
28 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Lori Zeltser updated on February 28, 2020
tube, mus musculus, immunolabeling + More
Dataset Banner Image

Robust 3-Dimensional Visualization of Human Colon Enteric Nervous System Without Tissue Sectioning

Details a new technique toimage the enteric nervous system (ENS) and other cells that control motility in the human colon in three dimensions, by combining tissue clearing, immunohistochemistry, confocal microscopy, and quantitative image analysis.
334 Files
239.65 GB
323 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Robert Heuckeroth updated on February 27, 2020
obsolete sclerite, morphology, large intestine + More
Dataset Banner Image

Influence of direct colon tissue electrical stimulation on colonic motility in anesthetized male Yucatan minipig

Direct proximal colon, transverse colon and colorectum wall electrical stimulation; monitor colon wall bio-impedance and colon manometry in all regions (proximal, transverse and distal) before, during and post stimulation.
202 Files
64.04 GB
42 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Yvette Tache updated on February 27, 2020
large intestine, autonomic, pelvic + More
Dataset Banner Image

Effect of Intermittent Hypoxia Preconditioning in Rats with Chronic Cervical Spinal Cord Injury – An electrophysiological Study

Phrenic nerve, arterial blood pressure, and respiratory recordings for phrenic long term facilitation protocol.
67 Files
48.79 GB
58 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Elisa Gonzalez-Rothi updated on February 27, 2020
suture, spinal cord, vessel
Dataset Banner Image

Vagus nerve stimulation promotes gastric emptying by increasing pyloric opening measured with magnetic resonance imaging

Explores the impact vagus nerve stimulation haves on gastric emptying via pyloric opening measurement and magnetic resonance imaging.
119 Files
7.55 GB
50 Records
CC-BY-4.0

Sponsored by

NIH SPARC Program

Terry Powley updated on February 27, 2020
hypodermis, alimentary part of gastrointestinal system, holtzman sprague-dawley rat + More
  • 1
  • 2
  • 3